Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase beta subunit | VAPA_RS15190 | Not Available | Positive | 3253855 - 3255411 | 55130.2 |
| formate dehydrogenase subunit alpha | VAPA_RS15195 | Not Available | Positive | 3255431 - 3258304 | 104657.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | VAPA_RS15200 | Not Available | Positive | 3258301 - 3259137 | 28966.0 |
| formate dehydrogenase subunit delta | VAPA_RS15205 | Not Available | Positive | 3259148 - 3259372 | 8528.41 |
| class ii fructose-bisphosphate aldolase | VAPA_RS15210 | Not Available | Negative | 3259389 - 3260405 | 36599.0 |
| phosphoglycerate kinase | VAPA_RS15215 | Not Available | Negative | 3260446 - 3261627 | 41234.6 |
| transketolase | VAPA_RS15220 | Not Available | Negative | 3261624 - 3263663 | 72866.7 |
| phosphoribulokinase | VAPA_RS15225 | Not Available | Negative | 3263719 - 3264597 | 32910.4 |
| class 1 fructose-bisphosphatase | VAPA_RS15230 | Not Available | Negative | 3264645 - 3265721 | 39201.6 |
| had family hydrolase | VAPA_RS15235 | Not Available | Negative | 3265740 - 3266465 | 25070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
