Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | VAPA_RS15140 | Not Available | Negative | 3244294 - 3244830 | 18646.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS15145 | Not Available | Negative | 3245004 - 3245963 | 32933.8 |
| response regulator transcription factor | VAPA_RS15150 | Not Available | Positive | 3246091 - 3246771 | 24780.4 |
| sensor histidine kinase | VAPA_RS15155 | Not Available | Positive | 3246768 - 3248189 | 52108.2 |
| rna-binding s4 domain-containing protein | VAPA_RS15160 | Not Available | Positive | 3248194 - 3248628 | 16176.0 |
| ppk2 family polyphosphate kinase | VAPA_RS15165 | Not Available | Positive | 3248678 - 3249484 | 30779.1 |
| hypothetical protein | VAPA_RS15170 | Not Available | Negative | 3249498 - 3250166 | 23539.3 |
| abc transporter atp-binding protein | VAPA_RS15175 | Not Available | Positive | 3250307 - 3252115 | 64643.2 |
| substrate-binding domain-containing protein | VAPA_RS15180 | Not Available | Negative | 3252158 - 3253270 | 40286.4 |
| formate dehydrogenase subunit gamma | VAPA_RS15185 | Not Available | Positive | 3253394 - 3253858 | 16184.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
