Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpx | VAPA_RS14990 | Not Available | Negative | 3209488 - 3210753 | 46224.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | VAPA_RS14995 | Not Available | Negative | 3210876 - 3211484 | 22343.0 |
| trigger factor | VAPA_RS15000 | Not Available | Negative | 3211599 - 3212915 | 48670.9 |
| Trna-leu | Not Available | Not Available | Positive | 3212942 - 3213028 | Not Available |
| efflux rnd transporter permease subunit | VAPA_RS15010 | Not Available | Negative | 3213142 - 3216297 | 114471.0 |
| efflux rnd transporter periplasmic adaptor subunit | VAPA_RS15015 | Not Available | Negative | 3216294 - 3217487 | 41129.8 |
| potassium transporter kup | VAPA_RS15020 | Not Available | Negative | 3217595 - 3219439 | 65856.6 |
| squalene synthase hpnc | VAPA_RS15025 | Not Available | Positive | 3219586 - 3220497 | 33790.6 |
| presqualene diphosphate synthase hpnd | VAPA_RS15030 | Not Available | Positive | 3220494 - 3221333 | 31377.8 |
| hydroxysqualene dehydroxylase hpne | VAPA_RS15035 | Not Available | Positive | 3221330 - 3222589 | 44394.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
