Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate--coa ligase | VAPA_RS14840 | Not Available | Negative | 3179180 - 3180715 | 55693.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS14845 | Not Available | Negative | 3180773 - 3181762 | 34342.3 |
| malonyl-coa decarboxylase | VAPA_RS14850 | Not Available | Negative | 3181841 - 3183325 | 55155.3 |
| gntr family transcriptional regulator | VAPA_RS14855 | Not Available | Negative | 3183375 - 3184043 | 25090.3 |
| prolipoprotein diacylglyceryl transferase | VAPA_RS14860 | Not Available | Negative | 3184169 - 3184990 | 31046.3 |
| hypothetical protein | VAPA_RS14865 | Not Available | Negative | 3185049 - 3185318 | 9420.98 |
| sdr family oxidoreductase | VAPA_RS14870 | Not Available | Negative | 3185352 - 3186125 | 27241.1 |
| lysr family transcriptional regulator | VAPA_RS14875 | Not Available | Positive | 3186256 - 3187200 | 34496.7 |
| lysr family transcriptional regulator | VAPA_RS14880 | Not Available | Negative | 3187207 - 3188169 | 34877.8 |
| dihydroxy-acid dehydratase | VAPA_RS14885 | Not Available | Positive | 3188274 - 3189968 | 59220.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
