Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | VAPA_RS14640 | Not Available | Negative | 3137206 - 3137700 | 17151.8 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | VAPA_RS14645 | Not Available | Negative | 3137697 - 3138410 | 25081.3 |
| transcription-repair coupling factor | VAPA_RS14650 | Not Available | Positive | 3138530 - 3142024 | 129759.0 |
| phosphoserine phosphatase serb | VAPA_RS14655 | Not Available | Positive | 3142021 - 3142731 | 25361.0 |
| ldh family oxidoreductase | VAPA_RS14660 | Not Available | Positive | 3143088 - 3144155 | 37562.3 |
| duf6172 family protein | VAPA_RS14665 | Not Available | Negative | 3144163 - 3144489 | 12274.7 |
| hypothetical protein | VAPA_RS14670 | Not Available | Positive | 3144553 - 3144780 | 7898.76 |
| plp-dependent aminotransferase family protein | VAPA_RS14675 | Not Available | Negative | 3144790 - 3145977 | 42393.3 |
| endonuclease iii | VAPA_RS14680 | Not Available | Positive | 3146119 - 3146766 | 23794.1 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS14685 | Not Available | Negative | 3146777 - 3147673 | 32656.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
