Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | VAPA_RS14540 | Not Available | Positive | 3117519 - 3118844 | 45936.9 |
| d-amino acid dehydrogenase | VAPA_RS14545 | Not Available | Positive | 3118897 - 3120150 | 44750.0 |
| nad(p)h-hydrate dehydratase | VAPA_RS14550 | Not Available | Positive | 3120208 - 3121668 | 49112.9 |
| sdr family oxidoreductase | VAPA_RS14555 | Not Available | Negative | 3121676 - 3122440 | 26697.1 |
| ribonuclease r | VAPA_RS14560 | Not Available | Negative | 3122499 - 3124766 | 83576.7 |
| Trna-leu | Not Available | Not Available | Positive | 3124847 - 3124931 | Not Available |
| ykva family protein | VAPA_RS14570 | Not Available | Positive | 3125439 - 3125831 | 14743.3 |
| hypothetical protein | VAPA_RS14575 | Not Available | Positive | 3125911 - 3126210 | 10964.9 |
| hypothetical protein | VAPA_RS14580 | Not Available | Negative | 3126474 - 3126752 | 10202.2 |
| 30s ribosomal protein s12 methylthiotransferase rimo | VAPA_RS14585 | Not Available | Negative | 3126894 - 3128300 | 50793.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
