Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | VAPA_RS14490 | Not Available | Negative | 3106906 - 3107448 | 20253.0 |
| outer membrane protein assembly factor bama | VAPA_RS14495 | Not Available | Negative | 3107449 - 3109884 | 89947.2 |
| rip metalloprotease rsep | VAPA_RS14500 | Not Available | Negative | 3109923 - 3111293 | 49550.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | VAPA_RS14505 | Not Available | Negative | 3111318 - 3112505 | 41938.6 |
| phosphatidate cytidylyltransferase | VAPA_RS14510 | Not Available | Negative | 3112502 - 3113347 | 30268.2 |
| polyprenyl diphosphate synthase | VAPA_RS14515 | Not Available | Negative | 3113376 - 3114119 | 27032.3 |
| ribosome recycling factor | VAPA_RS14520 | Not Available | Negative | 3114128 - 3114697 | 20941.2 |
| ump kinase | VAPA_RS14525 | Not Available | Negative | 3114711 - 3115433 | 25406.0 |
| translation elongation factor ts | VAPA_RS14530 | Not Available | Negative | 3115536 - 3116459 | 32454.1 |
| 30s ribosomal protein s2 | VAPA_RS14535 | Not Available | Negative | 3116541 - 3117296 | 27533.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
