Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | VAPA_RS14340 | Not Available | Positive | 3077125 - 3077781 | 23569.2 |
| asparaginase | VAPA_RS14345 | Not Available | Negative | 3077810 - 3078799 | 33842.8 |
| transcriptional repressor lexa | VAPA_RS14350 | Not Available | Positive | 3078873 - 3079556 | 24860.2 |
| hypothetical protein | VAPA_RS14355 | Not Available | Positive | 3079695 - 3080069 | 13225.3 |
| d-2-hydroxyacid dehydrogenase family protein | VAPA_RS14360 | Not Available | Positive | 3080162 - 3081169 | 36642.4 |
| mfs transporter | VAPA_RS14365 | Not Available | Positive | 3081230 - 3082387 | 39598.5 |
| 3-hydroxyacyl-coa dehydrogenase | VAPA_RS14370 | Not Available | Positive | 3082519 - 3084039 | 54220.4 |
| oxepin-coa hydrolase, alternative type | VAPA_RS14375 | Not Available | Positive | 3084071 - 3084850 | 27324.4 |
| crp/fnr family transcriptional regulator | VAPA_RS14380 | Not Available | Positive | 3084910 - 3085629 | 26727.3 |
| phosphotransferase | VAPA_RS14385 | Not Available | Positive | 3085631 - 3086719 | 40478.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
