Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS14290 | Not Available | Positive | 3070351 - 3070674 | 10864.8 |
| hypothetical protein | VAPA_RS14295 | Not Available | Positive | 3070828 - 3071022 | 6574.26 |
| duf192 domain-containing protein | VAPA_RS14300 | Not Available | Positive | 3071107 - 3071565 | 17190.0 |
| superoxide dismutase | VAPA_RS14305 | Not Available | Negative | 3071633 - 3072214 | 21418.2 |
| exodeoxyribonuclease vii large subunit | VAPA_RS14310 | Not Available | Negative | 3072265 - 3073575 | 47052.0 |
| mota/tolq/exbb proton channel family protein | VAPA_RS14315 | Not Available | Positive | 3073889 - 3074521 | 22476.7 |
| exbd/tolr family protein | VAPA_RS14320 | Not Available | Positive | 3074574 - 3075014 | 15742.0 |
| tetraacyldisaccharide 4'-kinase | VAPA_RS14325 | Not Available | Positive | 3075015 - 3076055 | 37563.3 |
| trm112 family protein | VAPA_RS14330 | Not Available | Positive | 3076036 - 3076218 | 6693.14 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | VAPA_RS14335 | Not Available | Positive | 3076215 - 3076988 | 27283.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
