Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator ompr | VAPA_RS14240 | Not Available | Negative | 3059213 - 3059935 | 26814.7 |
| hypothetical protein | VAPA_RS14245 | Not Available | Positive | 3060127 - 3060573 | 14240.2 |
| hypothetical protein | VAPA_RS14250 | Not Available | Positive | 3060597 - 3060887 | 10548.5 |
| sterol desaturase family protein | VAPA_RS14255 | Not Available | Positive | 3060889 - 3061749 | 32052.8 |
| alpha/beta hydrolase | VAPA_RS14260 | Not Available | Positive | 3061746 - 3062660 | 32168.8 |
| exodeoxyribonuclease i | VAPA_RS14265 | Not Available | Negative | 3062800 - 3064239 | 54264.5 |
| cardiolipin synthase | VAPA_RS14270 | Not Available | Negative | 3064240 - 3065685 | 53534.9 |
| atp-dependent clp protease atp-binding subunit clpa | VAPA_RS14275 | Not Available | Negative | 3065796 - 3068117 | 84592.8 |
| atp-dependent clp protease adapter clps | VAPA_RS14280 | Not Available | Negative | 3068185 - 3068544 | 13150.8 |
| nadp-dependent isocitrate dehydrogenase | VAPA_RS14285 | Not Available | Negative | 3068872 - 3070131 | 45794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
