Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urc4/urg3 family protein | VAPA_RS14190 | Not Available | Positive | 3048394 - 3049809 | 50400.5 |
| uracil phosphoribosyltransferase | VAPA_RS14195 | Not Available | Positive | 3049843 - 3050472 | 23116.5 |
| bmp family protein | VAPA_RS14200 | Not Available | Positive | 3050549 - 3051550 | 35808.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | VAPA_RS14205 | Not Available | Positive | 3051559 - 3052506 | 33835.9 |
| abc transporter atp-binding protein | VAPA_RS14210 | Not Available | Positive | 3052503 - 3054098 | 56448.6 |
| abc transporter permease | VAPA_RS14215 | Not Available | Positive | 3054098 - 3055159 | 36424.8 |
| abc transporter permease | VAPA_RS14220 | Not Available | Positive | 3055156 - 3056079 | 32474.7 |
| hypothetical protein | VAPA_RS14225 | Not Available | Positive | 3056076 - 3056531 | 16501.4 |
| amidohydrolase family protein | VAPA_RS14230 | Not Available | Positive | 3056609 - 3057889 | 45828.8 |
| atp-binding protein | VAPA_RS14235 | Not Available | Negative | 3057906 - 3059216 | 46472.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
