Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | VAPA_RS14140 | Not Available | Negative | 3039248 - 3040246 | 37321.3 |
| amp-binding protein | VAPA_RS14145 | Not Available | Negative | 3040246 - 3041955 | 59891.3 |
| hypothetical protein | VAPA_RS14150 | Not Available | Negative | 3042037 - 3042681 | 23546.2 |
| phosphopantetheine-binding protein | VAPA_RS14155 | Not Available | Negative | 3042685 - 3042996 | 11209.2 |
| helicase hera-like domain-containing protein | VAPA_RS14160 | Not Available | Positive | 3043098 - 3044609 | 53620.1 |
| nrsf family protein | VAPA_RS14165 | Not Available | Negative | 3044628 - 3045269 | 22562.7 |
| sigma-70 family rna polymerase sigma factor | VAPA_RS14170 | Not Available | Negative | 3045266 - 3045832 | 20881.1 |
| hypothetical protein | VAPA_RS14175 | Not Available | Positive | 3046028 - 3046447 | 14701.6 |
| duf6152 family protein | VAPA_RS14180 | Not Available | Positive | 3046462 - 3046929 | 17134.6 |
| gtp cyclohydrolase ii | VAPA_RS14185 | Not Available | Positive | 3047045 - 3048397 | 48386.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
