Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | VAPA_RS14090 | Not Available | Positive | 3030010 - 3030798 | 28346.3 |
| rid family hydrolase | VAPA_RS14095 | Not Available | Positive | 3030801 - 3031832 | 36976.9 |
| lysophospholipid acyltransferase family protein | VAPA_RS14100 | Not Available | Positive | 3031863 - 3032666 | 29798.3 |
| glycosyltransferase family 2 protein | VAPA_RS14105 | Not Available | Positive | 3032633 - 3033409 | 28863.9 |
| 3-oxoacyl-acp reductase fabg | VAPA_RS14110 | Not Available | Negative | 3033438 - 3034169 | 25232.6 |
| thioesterase | VAPA_RS14115 | Not Available | Negative | 3034166 - 3034639 | 16419.4 |
| class i sam-dependent methyltransferase | VAPA_RS14120 | Not Available | Negative | 3034636 - 3035400 | 27937.8 |
| polysaccharide deacetylase family protein | VAPA_RS14125 | Not Available | Negative | 3035397 - 3036242 | 29939.2 |
| mmpl family transporter | VAPA_RS14130 | Not Available | Negative | 3036242 - 3038641 | 83697.6 |
| lola-related protein | VAPA_RS14135 | Not Available | Negative | 3038638 - 3039276 | 22674.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
