Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system beta propeller repeat protein tolb | VAPA_RS14040 | Not Available | Negative | 3019752 - 3020978 | 43623.2 |
| lipid a export permease/atp-binding protein msba | VAPA_RS14045 | Not Available | Positive | 3021230 - 3023014 | 64699.3 |
| ribonuclease g | VAPA_RS14050 | Not Available | Negative | 3023022 - 3024548 | 56203.6 |
| maf family protein | VAPA_RS14055 | Not Available | Negative | 3024556 - 3025161 | 21602.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | VAPA_RS14060 | Not Available | Negative | 3025158 - 3025625 | 17237.8 |
| ribosome silencing factor | VAPA_RS14065 | Not Available | Negative | 3025622 - 3026287 | 23667.7 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | VAPA_RS14070 | Not Available | Negative | 3026287 - 3026916 | 22456.1 |
| oxygen-dependent coproporphyrinogen oxidase | VAPA_RS14075 | Not Available | Negative | 3026913 - 3027830 | 34188.5 |
| phosphoribosylamine--glycine ligase | VAPA_RS14080 | Not Available | Negative | 3027830 - 3029128 | 46348.3 |
| yebc/pmpr family dna-binding transcriptional regulator | VAPA_RS14085 | Not Available | Negative | 3029167 - 3029892 | 26041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
