Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilt/pilu family type 4a pilus atpase | VAPA_RS13990 | Not Available | Positive | 3010194 - 3011342 | 42069.0 |
| succinyl-diaminopimelate desuccinylase | VAPA_RS13995 | Not Available | Positive | 3011371 - 3012546 | 41594.4 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | VAPA_RS14000 | Not Available | Positive | 3012543 - 3013424 | 31512.5 |
| ribosomal protection-like abc-f family protein | VAPA_RS14005 | Not Available | Positive | 3013564 - 3015576 | 73469.8 |
| hypothetical protein | VAPA_RS14010 | Not Available | Positive | 3015603 - 3016106 | 17560.8 |
| helix-turn-helix domain-containing protein | VAPA_RS14015 | Not Available | Positive | 3016515 - 3017231 | 26068.7 |
| Trna-lys | Not Available | Not Available | Positive | 3017461 - 3017536 | Not Available |
| thif family adenylyltransferase | VAPA_RS14025 | Not Available | Negative | 3017597 - 3018334 | 25586.5 |
| tol-pal system protein ybgf | VAPA_RS14030 | Not Available | Negative | 3018459 - 3019208 | 27956.0 |
| peptidoglycan-associated lipoprotein pal | VAPA_RS14035 | Not Available | Negative | 3019208 - 3019726 | 18523.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
