Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | VAPA_RS13950 | Not Available | Positive | 2996191 - 2997366 | 42518.2 |
| duf3309 family protein | VAPA_RS33900 | Not Available | Positive | 2997500 - 2997658 | 5698.52 |
| atp-dependent rna helicase hrpa | VAPA_RS13955 | Not Available | Negative | 2997734 - 3001522 | 141328.0 |
| aaa family atpase | VAPA_RS13960 | Not Available | Positive | 3002000 - 3003982 | 72864.5 |
| amino-acid n-acetyltransferase | VAPA_RS13965 | Not Available | Positive | 3004023 - 3005369 | 49415.6 |
| yran family protein | VAPA_RS33905 | Not Available | Positive | 3005392 - 3006038 | 22521.2 |
| zinc-dependent alcohol dehydrogenase family protein | VAPA_RS13970 | Not Available | Negative | 3006045 - 3007058 | 34622.5 |
| lysr family transcriptional regulator | VAPA_RS13975 | Not Available | Positive | 3007154 - 3008020 | 31682.2 |
| succinyldiaminopimelate transaminase | VAPA_RS13980 | Not Available | Positive | 3008052 - 3009272 | 43932.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | VAPA_RS13985 | Not Available | Positive | 3009316 - 3010140 | 29248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
