Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VAPA_RS13850 | Not Available | Negative | 2976418 - 2978040 | 58496.1 |
| abc transporter permease | VAPA_RS13855 | Not Available | Negative | 2978046 - 2979089 | 38434.0 |
| microcin c abc transporter permease yejb | VAPA_RS13860 | Not Available | Negative | 2979082 - 2980116 | 38560.9 |
| extracellular solute-binding protein | VAPA_RS13865 | Not Available | Negative | 2980144 - 2981940 | 66813.5 |
| enoyl-acp reductase fabi | VAPA_RS13870 | Not Available | Positive | 2981978 - 2982760 | 27455.9 |
| dna ligase | VAPA_RS13875 | Not Available | Positive | 2982779 - 2983630 | 30937.3 |
| arginine/lysine/ornithine decarboxylase | VAPA_RS13880 | Not Available | Negative | 2983667 - 2985967 | 86235.0 |
| nfed family protein | VAPA_RS13885 | Not Available | Positive | 2986076 - 2986501 | 14831.0 |
| spfh domain-containing protein | VAPA_RS13890 | Not Available | Positive | 2986530 - 2987459 | 33641.6 |
| Trna-ser | Not Available | Not Available | Positive | 2987484 - 2987574 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
