Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor family protein | VAPA_RS13800 | Not Available | Positive | 2964409 - 2965230 | 29699.5 |
| lipoprotein | VAPA_RS13805 | Not Available | Positive | 2965304 - 2965699 | 13683.4 |
| dmt family transporter | VAPA_RS13810 | Not Available | Negative | 2965772 - 2966701 | 32434.8 |
| translational gtpase typa | VAPA_RS13815 | Not Available | Negative | 2966715 - 2968550 | 67302.9 |
| trna pseudouridine(55) synthase trub | VAPA_RS13820 | Not Available | Negative | 2968547 - 2969503 | 34243.2 |
| 30s ribosome-binding factor rbfa | VAPA_RS13825 | Not Available | Negative | 2969506 - 2969877 | 13721.5 |
| translation initiation factor if-2 | VAPA_RS13830 | Not Available | Negative | 2969902 - 2972856 | 104973.0 |
| transcription termination factor nusa | VAPA_RS13835 | Not Available | Negative | 2972881 - 2974365 | 54801.4 |
| ribosome maturation factor rimp | VAPA_RS13840 | Not Available | Negative | 2974383 - 2975030 | 23286.6 |
| ybfb/yjij family mfs transporter | VAPA_RS13845 | Not Available | Negative | 2975199 - 2976398 | 41147.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
