Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | VAPA_RS13750 | Not Available | Negative | 2957484 - 2959100 | 58972.1 |
| type ii toxin-antitoxin system vapc family toxin | VAPA_RS13755 | Not Available | Negative | 2959115 - 2959534 | 15181.1 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | VAPA_RS13760 | Not Available | Negative | 2959546 - 2959794 | 9185.14 |
| imp dehydrogenase | VAPA_RS13765 | Not Available | Negative | 2959883 - 2961352 | 51642.4 |
| duf4124 domain-containing protein | VAPA_RS13770 | Not Available | Positive | 2961533 - 2962045 | 18167.5 |
| rnfh family protein | VAPA_RS13775 | Not Available | Negative | 2962059 - 2962394 | 12437.9 |
| type ii toxin-antitoxin system rata family toxin | VAPA_RS13780 | Not Available | Negative | 2962394 - 2962840 | 16491.7 |
| ssra-binding protein smpb | VAPA_RS13785 | Not Available | Positive | 2962903 - 2963379 | 18106.9 |
| lipoprotein | VAPA_RS13790 | Not Available | Positive | 2963472 - 2963852 | 12943.2 |
| sigma-70 family rna polymerase sigma factor | VAPA_RS13795 | Not Available | Positive | 2963877 - 2964392 | 18987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
