Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | VAPA_RS13610 | Not Available | Negative | 2933337 - 2933837 | 17696.2 |
| rna 2',3'-cyclic phosphodiesterase | VAPA_RS13615 | Not Available | Negative | 2933935 - 2934555 | 22616.2 |
| protocatechuate 3,4-dioxygenase | VAPA_RS13620 | Not Available | Positive | 2934681 - 2935313 | 22814.8 |
| pepsy domain-containing protein | VAPA_RS13625 | Not Available | Negative | 2935246 - 2936817 | 58092.4 |
| tonb-dependent receptor | VAPA_RS13630 | Not Available | Negative | 2936850 - 2938997 | 77359.1 |
| cobw family gtp-binding protein | VAPA_RS13635 | Not Available | Negative | 2938994 - 2939971 | 36048.4 |
| metal abc transporter substrate-binding protein | VAPA_RS13640 | Not Available | Negative | 2940012 - 2940917 | 32852.1 |
| metal abc transporter permease | VAPA_RS13645 | Not Available | Negative | 2940919 - 2941794 | 29916.6 |
| metal abc transporter atp-binding protein | VAPA_RS13650 | Not Available | Negative | 2941850 - 2942590 | 26698.2 |
| hypothetical protein | VAPA_RS34485 | Not Available | Negative | 2942602 - 2942754 | 5644.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
