Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS13560 | Not Available | Positive | 2925483 - 2925755 | 9960.17 |
| ld-carboxypeptidase | VAPA_RS13565 | Not Available | Negative | 2925783 - 2926736 | 34199.3 |
| trna adenosine(34) deaminase tada | VAPA_RS13570 | Not Available | Negative | 2926733 - 2927842 | 39530.1 |
| hypothetical protein | VAPA_RS13575 | Not Available | Negative | 2927832 - 2928035 | 6999.6 |
| fmn-binding negative transcriptional regulator | VAPA_RS13580 | Not Available | Negative | 2928037 - 2928681 | 23798.7 |
| ankyrin repeat domain-containing protein | VAPA_RS13585 | Not Available | Negative | 2928732 - 2929430 | 24292.4 |
| glcg/hbps family heme-binding protein | VAPA_RS13590 | Not Available | Negative | 2929430 - 2929933 | 16556.8 |
| response regulator transcription factor | VAPA_RS13595 | Not Available | Negative | 2930079 - 2930705 | 22917.6 |
| atp-binding protein | VAPA_RS13600 | Not Available | Negative | 2930702 - 2932201 | 53960.9 |
| duf72 domain-containing protein | VAPA_RS13605 | Not Available | Positive | 2932264 - 2933340 | 38637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
