Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein tagf | VAPA_RS01225 | Not Available | Positive | 266288 - 267013 | 26348.1 |
| serine/threonine protein kinase | VAPA_RS01230 | Not Available | Positive | 267039 - 269192 | 74266.8 |
| yran family protein | VAPA_RS33720 | Not Available | Negative | 269221 - 269624 | 14526.2 |
| hypothetical protein | VAPA_RS01240 | Not Available | Negative | 270145 - 270663 | 19445.4 |
| is66 family transposase | VAPA_RS01245 | Not Available | Negative | 270715 - 272283 | 57065.3 |
| is66 family insertion sequence element accessory protein tnpb | VAPA_RS01250 | Not Available | Negative | 272361 - 272708 | 12795.9 |
| is66-like element accessory protein tnpa | VAPA_RS01255 | Not Available | Negative | 272705 - 273106 | 14314.3 |
| hypothetical protein | VAPA_RS01260 | Not Available | Negative | 273209 - 273418 | 7458.95 |
| hypothetical protein | VAPA_RS01265 | Not Available | Negative | 273507 - 274505 | 37513.2 |
| thioredoxin family protein | VAPA_RS01270 | Not Available | Negative | 274590 - 274979 | 15070.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
