Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udgx family uracil-dna binding protein | VAPA_RS13510 | Not Available | Positive | 2913463 - 2914176 | 26020.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | VAPA_RS13515 | Not Available | Negative | 2914140 - 2914748 | 23415.1 |
| helicase c-terminal domain-containing protein | VAPA_RS13520 | Not Available | Negative | 2914735 - 2917074 | 85846.0 |
| response regulator | VAPA_RS13525 | Not Available | Positive | 2917203 - 2920697 | 128321.0 |
| cher family methyltransferase | VAPA_RS13530 | Not Available | Positive | 2920694 - 2921548 | 32139.5 |
| chemotaxis protein cheb | VAPA_RS13535 | Not Available | Positive | 2921545 - 2922150 | 21608.3 |
| hybrid sensor histidine kinase/response regulator | VAPA_RS13540 | Not Available | Positive | 2922140 - 2923360 | 45491.0 |
| response regulator | VAPA_RS13545 | Not Available | Positive | 2923435 - 2923794 | 12844.1 |
| hypothetical protein | VAPA_RS13550 | Not Available | Negative | 2923809 - 2924168 | 13256.5 |
| adenylate/guanylate cyclase domain-containing protein | VAPA_RS13555 | Not Available | Negative | 2924299 - 2925246 | 34322.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
