Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | VAPA_RS13410 | Not Available | Positive | 2893997 - 2894344 | 12709.0 |
| phosphoketolase | VAPA_RS13415 | Not Available | Positive | 2894337 - 2896688 | 86958.8 |
| sulfite exporter taue/safe family protein | VAPA_RS13420 | Not Available | Negative | 2896722 - 2897414 | 23518.4 |
| oxygen-independent coproporphyrinogen iii oxidase | VAPA_RS13425 | Not Available | Negative | 2897417 - 2898829 | 52149.3 |
| hypothetical protein | VAPA_RS13430 | Not Available | Negative | 2898826 - 2899077 | 9126.29 |
| fixh family protein | VAPA_RS13435 | Not Available | Negative | 2899074 - 2899340 | 9892.78 |
| cytochrome c oxidase accessory protein ccog | VAPA_RS13440 | Not Available | Negative | 2899351 - 2900808 | 54885.3 |
| cytochrome-c oxidase, cbb3-type subunit iii | VAPA_RS13445 | Not Available | Negative | 2900824 - 2901735 | 32631.0 |
| cbb3-type cytochrome oxidase subunit 3 | VAPA_RS13450 | Not Available | Negative | 2901753 - 2901893 | 5280.42 |
| cytochrome-c oxidase, cbb3-type subunit ii | VAPA_RS13455 | Not Available | Negative | 2901907 - 2902536 | 23611.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
