Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dodecin | VAPA_RS13310 | Not Available | Negative | 2870309 - 2870515 | 7596.05 |
| nitrite reductase large subunit nirb | VAPA_RS13315 | Not Available | Positive | 2870888 - 2873371 | 90683.0 |
| nitrite reductase small subunit nird | VAPA_RS13320 | Not Available | Positive | 2873386 - 2873835 | 15787.5 |
| uroporphyrinogen-iii c-methyltransferase | VAPA_RS13325 | Not Available | Positive | 2873884 - 2874702 | 27706.6 |
| yran family protein | VAPA_RS13330 | Not Available | Positive | 2874763 - 2875576 | 28852.6 |
| bifunctional protein-serine/threonine kinase/phosphatase | VAPA_RS13335 | Not Available | Positive | 2875599 - 2877335 | 63985.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | VAPA_RS13340 | Not Available | Negative | 2877363 - 2881448 | 131004.0 |
| hypothetical protein | VAPA_RS13345 | Not Available | Negative | 2881757 - 2881993 | 8332.57 |
| type iv pilin protein | VAPA_RS13350 | Not Available | Positive | 2882270 - 2882680 | 14928.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VAPA_RS13355 | Not Available | Positive | 2882674 - 2883273 | 20870.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
