Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygfz/gcvt domain-containing protein | VAPA_RS13260 | Not Available | Negative | 2862764 - 2863690 | 31855.4 |
| endolytic transglycosylase mltg | VAPA_RS13265 | Not Available | Positive | 2863813 - 2864835 | 36992.6 |
| dtmp kinase | VAPA_RS13270 | Not Available | Positive | 2864832 - 2865491 | 23679.3 |
| hypothetical protein | VAPA_RS13275 | Not Available | Positive | 2865488 - 2866510 | 36381.7 |
| pilz domain-containing protein | VAPA_RS13280 | Not Available | Positive | 2866507 - 2866887 | 13511.3 |
| tatd family hydrolase | VAPA_RS13285 | Not Available | Positive | 2867008 - 2867817 | 30020.6 |
| ankyrin repeat domain-containing protein | VAPA_RS13290 | Not Available | Positive | 2867814 - 2868491 | 24162.1 |
| duf2726 domain-containing protein | VAPA_RS13295 | Not Available | Positive | 2868623 - 2869090 | 16929.6 |
| cupin domain-containing protein | VAPA_RS13300 | Not Available | Negative | 2869283 - 2869663 | 13961.5 |
| secondary thiamine-phosphate synthase enzyme yjbq | VAPA_RS13305 | Not Available | Positive | 2869850 - 2870272 | 15779.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
