Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4150 domain-containing protein | VAPA_RS13210 | Not Available | Negative | 2850770 - 2851156 | 13457.7 |
| duf3540 domain-containing protein | VAPA_RS13215 | Not Available | Negative | 2851173 - 2851877 | 25480.7 |
| pentapeptide repeat-containing protein | VAPA_RS13220 | Not Available | Negative | 2851874 - 2853001 | 41389.2 |
| duf2169 domain-containing protein | VAPA_RS13225 | Not Available | Negative | 2852998 - 2855655 | 98469.1 |
| hypothetical protein | VAPA_RS13230 | Not Available | Negative | 2855674 - 2856120 | 16014.3 |
| type vi secretion system vgr family protein | VAPA_RS13235 | Not Available | Negative | 2856110 - 2858455 | 86638.2 |
| iron-containing alcohol dehydrogenase | VAPA_RS13240 | Not Available | Negative | 2858587 - 2859723 | 40000.4 |
| alpha/beta hydrolase | VAPA_RS13245 | Not Available | Positive | 2859793 - 2860770 | 34463.3 |
| ybgc/fadm family acyl-coa thioesterase | VAPA_RS13250 | Not Available | Positive | 2860767 - 2861645 | 32516.0 |
| hypothetical protein | VAPA_RS13255 | Not Available | Negative | 2861655 - 2862611 | 33892.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
