Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | VAPA_RS13160 | Not Available | Negative | 2840259 - 2841044 | 28253.5 |
| amino acid abc transporter permease | VAPA_RS13165 | Not Available | Negative | 2841041 - 2841700 | 24520.9 |
| amino acid abc transporter permease | VAPA_RS13170 | Not Available | Negative | 2841717 - 2842382 | 24178.3 |
| l-idonate 5-dehydrogenase | VAPA_RS13175 | Not Available | Negative | 2842429 - 2843466 | 36469.0 |
| transporter substrate-binding domain-containing protein | VAPA_RS13180 | Not Available | Negative | 2843471 - 2844325 | 30852.4 |
| substrate-binding periplasmic protein | VAPA_RS13185 | Not Available | Negative | 2844370 - 2845200 | 29453.6 |
| fadr/gntr family transcriptional regulator | VAPA_RS13190 | Not Available | Negative | 2845271 - 2846008 | 27095.4 |
| tex family protein | VAPA_RS13195 | Not Available | Positive | 2846195 - 2848570 | 86326.9 |
| patatin-like phospholipase family protein | VAPA_RS13200 | Not Available | Positive | 2848608 - 2849681 | 39829.6 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS13205 | Not Available | Positive | 2849774 - 2850757 | 34457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
