Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | VAPA_RS13010 | Not Available | Negative | 2806769 - 2807539 | 26966.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS13015 | Not Available | Negative | 2807775 - 2808752 | 34124.2 |
| pyridoxal-phosphate-dependent aminotransferase family protein | VAPA_RS13020 | Not Available | Negative | 2808870 - 2810114 | 44526.8 |
| gntr family transcriptional regulator | VAPA_RS13025 | Not Available | Positive | 2810236 - 2810931 | 25863.5 |
| fad-binding and (fe-s)-binding domain-containing protein | VAPA_RS13030 | Not Available | Positive | 2810945 - 2814022 | 110528.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | VAPA_RS13035 | Not Available | Positive | 2814044 - 2814637 | 20454.4 |
| mfs transporter | VAPA_RS13040 | Not Available | Negative | 2814653 - 2815873 | 41331.9 |
| lysr substrate-binding domain-containing protein | VAPA_RS13045 | Not Available | Negative | 2815940 - 2816854 | 33196.1 |
| mfs transporter | VAPA_RS13050 | Not Available | Positive | 2816933 - 2818105 | 40741.1 |
| pyridoxamine 5'-phosphate oxidase family protein | VAPA_RS13055 | Not Available | Positive | 2818102 - 2818716 | 22144.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
