Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | VAPA_RS12910 | Not Available | Positive | 2784879 - 2786189 | 47192.9 |
| abc transporter atp-binding protein | VAPA_RS12915 | Not Available | Positive | 2786190 - 2786966 | 27896.9 |
| abc transporter atp-binding protein | VAPA_RS12920 | Not Available | Positive | 2787316 - 2788011 | 25572.2 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | VAPA_RS12925 | Not Available | Positive | 2788164 - 2790269 | 75822.2 |
| m20 family peptidase | VAPA_RS12930 | Not Available | Positive | 2790293 - 2791768 | 52888.9 |
| acetyl-coa c-acyltransferase | VAPA_RS12935 | Not Available | Positive | 2791809 - 2792984 | 40844.3 |
| acyl-coa dehydrogenase | VAPA_RS12940 | Not Available | Positive | 2793121 - 2795028 | 68686.9 |
| hypothetical protein | VAPA_RS12945 | Not Available | Positive | 2795031 - 2795267 | 8448.57 |
| dabb family protein | VAPA_RS12950 | Not Available | Positive | 2795284 - 2795586 | 10975.4 |
| sdr family oxidoreductase | VAPA_RS12955 | Not Available | Positive | 2795615 - 2796409 | 28000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
