Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | VAPA_RS12810 | Not Available | Negative | 2758889 - 2759284 | 13507.2 |
| amino acid abc transporter substrate-binding protein | VAPA_RS12815 | Not Available | Positive | 2759458 - 2760492 | 37221.2 |
| amino acid abc transporter permease | VAPA_RS12820 | Not Available | Positive | 2760489 - 2761487 | 35646.9 |
| amino acid abc transporter permease | VAPA_RS12825 | Not Available | Positive | 2761484 - 2762542 | 38567.1 |
| hypothetical protein | VAPA_RS12830 | Not Available | Negative | 2762497 - 2763009 | 17451.2 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | VAPA_RS12835 | Not Available | Negative | 2763038 - 2764693 | 59001.0 |
| [protein-pii] uridylyltransferase | VAPA_RS12840 | Not Available | Negative | 2764778 - 2767384 | 97982.9 |
| type i methionyl aminopeptidase | VAPA_RS12845 | Not Available | Negative | 2767419 - 2768243 | 30045.1 |
| phosphoribosylformylglycinamidine synthase | VAPA_RS12850 | Not Available | Positive | 2768359 - 2772381 | 143818.0 |
| peptidylprolyl isomerase | VAPA_RS12855 | Not Available | Negative | 2772453 - 2773238 | 28892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
