Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein b | VAPA_RS12765 | Not Available | Positive | 2747144 - 2747647 | 18300.1 |
| hypothetical protein | VAPA_RS12770 | Not Available | Negative | 2747644 - 2748336 | 25317.8 |
| type ii toxin-antitoxin system hipa family toxin | VAPA_RS12775 | Not Available | Negative | 2748409 - 2749707 | 46883.9 |
| helix-turn-helix domain-containing protein | VAPA_RS12780 | Not Available | Negative | 2749704 - 2750033 | 11378.6 |
| hypothetical protein | VAPA_RS12785 | Not Available | Negative | 2750097 - 2750858 | 27571.9 |
| chromosome segregation protein smc | VAPA_RS12790 | Not Available | Positive | 2750972 - 2754487 | 130196.0 |
| cell division protein zipa c-terminal ftsz-binding domain-containing protein | VAPA_RS12795 | Not Available | Positive | 2754500 - 2755600 | 38837.9 |
| nad-dependent dna ligase liga | VAPA_RS12800 | Not Available | Positive | 2755623 - 2757707 | 76134.9 |
| hypothetical protein | VAPA_RS33895 | Not Available | Positive | 2757821 - 2758273 | 15898.8 |
| peptide deformylase | VAPA_RS12805 | Not Available | Positive | 2758308 - 2758847 | 19894.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
