Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fructose-bisphosphate aldolase | VAPA_RS12625 | Not Available | Positive | 2720952 - 2721983 | 36117.4 |
| peptide-methionine (s)-s-oxide reductase msra | VAPA_RS12630 | Not Available | Negative | 2721987 - 2722688 | 25454.2 |
| ycxb family protein | VAPA_RS12635 | Not Available | Negative | 2722757 - 2723245 | 18397.9 |
| crotonase/enoyl-coa hydratase family protein | VAPA_RS12640 | Not Available | Positive | 2723326 - 2724273 | 34840.5 |
| transglutaminase domain-containing protein | VAPA_RS12645 | Not Available | Negative | 2724436 - 2725350 | 33752.8 |
| fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | VAPA_RS12650 | Not Available | Negative | 2725384 - 2727231 | 65905.2 |
| oxidative damage protection protein | VAPA_RS12655 | Not Available | Negative | 2727247 - 2727522 | 10362.5 |
| sulfate abc transporter substrate-binding protein | VAPA_RS12660 | Not Available | Positive | 2727660 - 2728697 | 37550.7 |
| nadph-dependent fmn reductase | VAPA_RS12665 | Not Available | Positive | 2728739 - 2729323 | 20647.2 |
| hypothetical protein | VAPA_RS35420 | Not Available | Positive | 2729443 - 2729577 | 4639.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
