Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | VAPA_RS12480 | Not Available | Negative | 2691281 - 2692090 | 28898.7 |
| sulfur carrier protein this | VAPA_RS12485 | Not Available | Negative | 2692109 - 2692312 | 7170.71 |
| fad-dependent oxidoreductase | VAPA_RS12490 | Not Available | Negative | 2692309 - 2693400 | 38661.1 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | VAPA_RS12495 | Not Available | Positive | 2693541 - 2694398 | 29018.3 |
| purine-cytosine permease family protein | VAPA_RS12500 | Not Available | Negative | 2694352 - 2695692 | 46666.6 |
| tetr/acrr family transcriptional regulator | VAPA_RS33890 | Not Available | Negative | 2696004 - 2696654 | 23226.4 |
| hypothetical protein | VAPA_RS12505 | Not Available | Positive | 2696753 - 2697169 | 14776.7 |
| voc family protein | VAPA_RS12510 | Not Available | Positive | 2697198 - 2697593 | 14444.2 |
| aspartate aminotransferase family protein | VAPA_RS12515 | Not Available | Positive | 2697895 - 2699199 | 46388.7 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS12520 | Not Available | Negative | 2699186 - 2700226 | 36402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
