Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3619 family protein | VAPA_RS12330 | Not Available | Negative | 2662333 - 2662755 | 14779.5 |
| rna polymerase sigma factor | VAPA_RS12335 | Not Available | Negative | 2662752 - 2663318 | 21472.2 |
| acetolactate synthase 3 catalytic subunit | VAPA_RS12340 | Not Available | Positive | 2663604 - 2665388 | 65394.0 |
| acetolactate synthase small subunit | VAPA_RS12345 | Not Available | Positive | 2665502 - 2665993 | 18060.0 |
| duf4282 domain-containing protein | VAPA_RS12350 | Not Available | Positive | 2666049 - 2666321 | 9992.8 |
| ketol-acid reductoisomerase | VAPA_RS12355 | Not Available | Positive | 2666375 - 2667391 | 36722.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | VAPA_RS12360 | Not Available | Positive | 2667576 - 2668400 | 30147.8 |
| 2-isopropylmalate synthase | VAPA_RS12365 | Not Available | Positive | 2668585 - 2670288 | 62805.0 |
| 2-isopropylmalate synthase | VAPA_RS12370 | Not Available | Positive | 2670340 - 2671878 | 55334.6 |
| serine hydrolase | VAPA_RS12375 | Not Available | Positive | 2671994 - 2673175 | 42122.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
