Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d family protein | VAPA_RS12230 | Not Available | Positive | 2643666 - 2645240 | 57281.3 |
| sterol desaturase family protein | VAPA_RS12235 | Not Available | Positive | 2645250 - 2646038 | 30102.6 |
| fatty acid desaturase | VAPA_RS12240 | Not Available | Positive | 2646022 - 2646972 | 36961.9 |
| stld/darb family beta-ketosynthase | VAPA_RS12245 | Not Available | Positive | 2646976 - 2648919 | 71204.4 |
| duf6999 family protein | VAPA_RS12250 | Not Available | Positive | 2648903 - 2649802 | 33541.8 |
| hypothetical protein | VAPA_RS12255 | Not Available | Positive | 2649820 - 2650188 | 13335.7 |
| hypothetical protein | VAPA_RS33885 | Not Available | Positive | 2650175 - 2650405 | 8125.88 |
| hypothetical protein | VAPA_RS12265 | Not Available | Positive | 2650628 - 2651209 | 21637.7 |
| metal-dependent hydrolase | VAPA_RS12270 | Not Available | Negative | 2651203 - 2652039 | 31734.7 |
| tetr/acrr family transcriptional regulator | VAPA_RS12275 | Not Available | Positive | 2652153 - 2652785 | 22426.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
