Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | VAPA_RS11945 | Not Available | Positive | 2582588 - 2583421 | 29006.0 |
| pyridoxal phosphate-dependent aminotransferase | VAPA_RS11950 | Not Available | Positive | 2583418 - 2584593 | 42128.3 |
| alpha/beta fold hydrolase | VAPA_RS11955 | Not Available | Positive | 2584603 - 2585484 | 32232.3 |
| hydantoinase/carbamoylase family amidase | VAPA_RS11960 | Not Available | Positive | 2585484 - 2586758 | 44265.2 |
| cupin domain-containing protein | VAPA_RS11965 | Not Available | Positive | 2586755 - 2587693 | 33093.2 |
| hypothetical protein | VAPA_RS11970 | Not Available | Negative | 2587723 - 2588001 | 10131.2 |
| cytochrome c domain-containing protein | VAPA_RS11975 | Not Available | Positive | 2588299 - 2588829 | 19041.1 |
| hypothetical protein | VAPA_RS11980 | Not Available | Positive | 2589138 - 2590130 | 36792.3 |
| hypothetical protein | VAPA_RS11985 | Not Available | Positive | 2590124 - 2590909 | 28552.3 |
| is4 family transposase | VAPA_RS11990 | Not Available | Negative | 2591151 - 2592350 | 43703.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
