Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsd1 family plp-dependent enzyme | VAPA_RS11895 | Not Available | Negative | 2573532 - 2574674 | 40049.1 |
| hypothetical protein | VAPA_RS11900 | Not Available | Negative | 2574771 - 2575067 | 10335.6 |
| indoleacetamide hydrolase | VAPA_RS11905 | Not Available | Negative | 2575142 - 2576569 | 49406.4 |
| abc transporter substrate-binding protein | VAPA_RS11910 | Not Available | Positive | 2576710 - 2577717 | 36265.8 |
| abc transporter atp-binding protein | VAPA_RS11915 | Not Available | Positive | 2577732 - 2578583 | 31558.5 |
| abc transporter permease | VAPA_RS11920 | Not Available | Positive | 2578580 - 2579338 | 27732.0 |
| abc transporter permease | VAPA_RS11925 | Not Available | Positive | 2579317 - 2580075 | 26654.1 |
| class ii aldolase/adducin family protein | VAPA_RS11930 | Not Available | Positive | 2580078 - 2580848 | 27999.6 |
| taud/tfda dioxygenase family protein | VAPA_RS11935 | Not Available | Positive | 2580894 - 2581733 | 31477.2 |
| gntr family transcriptional regulator | VAPA_RS11940 | Not Available | Positive | 2581793 - 2582539 | 27399.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
