Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | VAPA_RS11795 | Not Available | Positive | 2552371 - 2553285 | 32633.4 |
| duf924 family protein | VAPA_RS11800 | Not Available | Negative | 2553286 - 2553837 | 20910.6 |
| chrd domain-containing protein | VAPA_RS11805 | Not Available | Positive | 2553953 - 2554402 | 15181.2 |
| patatin-like phospholipase family protein | VAPA_RS11810 | Not Available | Positive | 2554452 - 2555663 | 44424.9 |
| 3-hydroxybutyrate dehydrogenase | VAPA_RS11815 | Not Available | Positive | 2555742 - 2556524 | 27580.4 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11820 | Not Available | Positive | 2556651 - 2557658 | 34091.4 |
| tripartite tricarboxylate transporter tctb family protein | VAPA_RS11825 | Not Available | Positive | 2557702 - 2558175 | 16569.3 |
| tripartite tricarboxylate transporter permease | VAPA_RS11830 | Not Available | Positive | 2558192 - 2559700 | 52441.1 |
| bifunctional helix-turn-helix transcriptional regulator/gnat family n-acetyltransferase | VAPA_RS11835 | Not Available | Negative | 2559687 - 2560649 | 35681.0 |
| ygiq family radical sam protein | VAPA_RS11840 | Not Available | Positive | 2560802 - 2563201 | 88363.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
