Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis/stability protein pilw | VAPA_RS11645 | Not Available | Positive | 2526679 - 2527533 | 31635.5 |
| helix-turn-helix domain-containing protein | VAPA_RS11650 | Not Available | Positive | 2527526 - 2528476 | 31974.3 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | VAPA_RS11655 | Not Available | Positive | 2528473 - 2529753 | 46131.5 |
| histidine--trna ligase | VAPA_RS11660 | Not Available | Positive | 2529766 - 2531088 | 48177.1 |
| yfgm family protein | VAPA_RS11665 | Not Available | Positive | 2531094 - 2531786 | 25313.9 |
| outer membrane protein assembly factor bamb | VAPA_RS11670 | Not Available | Positive | 2531794 - 2532936 | 39544.2 |
| ribosome biogenesis gtpase der | VAPA_RS11675 | Not Available | Positive | 2532985 - 2534328 | 49377.2 |
| rna chaperone hfq | VAPA_RS11680 | Not Available | Positive | 2534475 - 2534738 | 9687.6 |
| gtpase hflx | VAPA_RS11685 | Not Available | Positive | 2534791 - 2535960 | 43254.6 |
| ftsh protease activity modulator hflk | VAPA_RS11690 | Not Available | Positive | 2536035 - 2537393 | 48790.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
