Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS11595 | Not Available | Positive | 2516391 - 2517056 | 24864.8 |
| pp2c family protein-serine/threonine phosphatase | VAPA_RS11600 | Not Available | Negative | 2517097 - 2517864 | 28029.7 |
| ydch family protein | VAPA_RS11605 | Not Available | Positive | 2517973 - 2518176 | 7781.4 |
| atp-dependent dna helicase | VAPA_RS11610 | Not Available | Positive | 2518173 - 2520239 | 74981.6 |
| outer membrane protein assembly factor bamd | VAPA_RS11615 | Not Available | Negative | 2520318 - 2521124 | 30139.5 |
| rlua family pseudouridine synthase | VAPA_RS11620 | Not Available | Positive | 2521181 - 2522164 | 35281.6 |
| smc-scp complex subunit scpb | VAPA_RS11625 | Not Available | Positive | 2522292 - 2523110 | 29595.6 |
| pseudouridine synthase | VAPA_RS11630 | Not Available | Positive | 2523107 - 2524927 | 64962.9 |
| nucleoside-diphosphate kinase | VAPA_RS11635 | Not Available | Positive | 2525079 - 2525504 | 15247.3 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | VAPA_RS11640 | Not Available | Positive | 2525526 - 2526674 | 42433.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
