Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | VAPA_RS11545 | Not Available | Positive | 2502560 - 2503609 | 37440.5 |
| alpha/beta fold hydrolase | VAPA_RS11550 | Not Available | Negative | 2503620 - 2504414 | 28392.1 |
| 4-hydroxyphenylacetate 3-hydroxylase family protein | VAPA_RS11555 | Not Available | Negative | 2504425 - 2506047 | 58972.2 |
| tetr/acrr family transcriptional regulator | VAPA_RS11560 | Not Available | Positive | 2506154 - 2506825 | 24369.0 |
| isochorismatase family protein | VAPA_RS11565 | Not Available | Positive | 2506838 - 2507440 | 22030.5 |
| propionate--coa ligase | VAPA_RS11570 | Not Available | Positive | 2507557 - 2509488 | 70157.2 |
| 2-oxoglutarate dehydrogenase e1 component | VAPA_RS11575 | Not Available | Positive | 2509667 - 2512543 | 106388.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | VAPA_RS11580 | Not Available | Positive | 2512597 - 2513844 | 43263.3 |
| dihydrolipoyl dehydrogenase | VAPA_RS11585 | Not Available | Positive | 2513859 - 2515289 | 50318.5 |
| cell division protein zape | VAPA_RS11590 | Not Available | Positive | 2515294 - 2516394 | 42445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
