Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin family protein | VAPA_RS11495 | Not Available | Negative | 2487679 - 2488323 | 22551.8 |
| m3 family metallopeptidase | VAPA_RS11500 | Not Available | Negative | 2488354 - 2490411 | 76003.0 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | VAPA_RS11505 | Not Available | Negative | 2490417 - 2491268 | 29742.3 |
| response regulator transcription factor | VAPA_RS11510 | Not Available | Negative | 2491351 - 2491983 | 23285.3 |
| pas domain s-box protein | VAPA_RS11515 | Not Available | Negative | 2491980 - 2494520 | 94239.0 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | VAPA_RS11520 | Not Available | Positive | 2494725 - 2497439 | 101140.0 |
| dihydrolipoyllysine-residue acetyltransferase | VAPA_RS11525 | Not Available | Positive | 2497490 - 2499151 | 56438.8 |
| protease | VAPA_RS11530 | Not Available | Positive | 2499148 - 2499741 | 21675.8 |
| dihydrolipoyl dehydrogenase | VAPA_RS11535 | Not Available | Positive | 2499738 - 2501567 | 63212.5 |
| c40 family peptidase | VAPA_RS11540 | Not Available | Negative | 2501650 - 2502237 | 21254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
