Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS11445 | Not Available | Positive | 2473479 - 2477513 | 142799.0 |
| hypothetical protein | VAPA_RS11450 | Not Available | Positive | 2477510 - 2481217 | 131053.0 |
| m12 family metallopeptidase | VAPA_RS33570 | Not Available | Positive | 2481238 - 2482332 | 40010.9 |
| yran family protein | VAPA_RS11460 | Not Available | Negative | 2482316 - 2482693 | 13359.6 |
| hypothetical protein | VAPA_RS11465 | Not Available | Positive | 2483286 - 2483408 | 4158.64 |
| nad(p)/fad-dependent oxidoreductase | VAPA_RS11470 | Not Available | Positive | 2483441 - 2484544 | 38124.0 |
| glycine zipper domain-containing protein | VAPA_RS11475 | Not Available | Positive | 2484693 - 2484989 | 10299.4 |
| phage holin family protein | VAPA_RS11480 | Not Available | Positive | 2485038 - 2485760 | 26482.4 |
| quinone-dependent dihydroorotate dehydrogenase | VAPA_RS11485 | Not Available | Negative | 2485794 - 2486867 | 37753.4 |
| ribose-5-phosphate isomerase rpia | VAPA_RS11490 | Not Available | Positive | 2486908 - 2487639 | 25289.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
