Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s protein assembly chaperone hsca | VAPA_RS11400 | Not Available | Positive | 2455512 - 2457368 | 65216.4 |
| isc system 2fe-2s type ferredoxin | VAPA_RS11405 | Not Available | Positive | 2457376 - 2457714 | 12402.6 |
| dna polymerase iii subunit epsilon | VAPA_RS11410 | Not Available | Positive | 2457727 - 2458434 | 25903.7 |
| Trna-val | Not Available | Not Available | Positive | 2458514 - 2458588 | Not Available |
| yran family protein | VAPA_RS33875 | Not Available | Negative | 2459114 - 2459319 | 7895.43 |
| hypothetical protein | VAPA_RS11420 | Not Available | Positive | 2459517 - 2459717 | 7504.27 |
| hypothetical protein | VAPA_RS11425 | Not Available | Positive | 2459777 - 2460412 | 22440.1 |
| duf6603 domain-containing protein | VAPA_RS11430 | Not Available | Positive | 2460471 - 2470397 | 338517.0 |
| hypothetical protein | VAPA_RS11435 | Not Available | Positive | 2470394 - 2472463 | 73121.7 |
| hypothetical protein | VAPA_RS34465 | Not Available | Positive | 2472460 - 2473479 | 37517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
