Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | VAPA_RS11350 | Not Available | Negative | 2445821 - 2446459 | 22384.1 |
| rnfabcdge type electron transport complex subunit b | VAPA_RS11355 | Not Available | Negative | 2446456 - 2447091 | 22305.5 |
| polyhydroxyalkanoate depolymerase | VAPA_RS11360 | Not Available | Negative | 2447088 - 2448503 | 53163.4 |
| amino acid aminotransferase | VAPA_RS11365 | Not Available | Negative | 2448662 - 2449858 | 42825.6 |
| excinuclease abc subunit uvrb | VAPA_RS11370 | Not Available | Positive | 2449964 - 2452081 | 79955.1 |
| fe-s cluster assembly transcriptional regulator iscr | VAPA_RS11375 | Not Available | Positive | 2452316 - 2452852 | 19304.4 |
| iscs subfamily cysteine desulfurase | VAPA_RS11380 | Not Available | Positive | 2452929 - 2454149 | 45128.2 |
| fe-s cluster assembly scaffold iscu | VAPA_RS11385 | Not Available | Positive | 2454179 - 2454598 | 14560.2 |
| iron-sulfur cluster assembly protein isca | VAPA_RS11390 | Not Available | Positive | 2454600 - 2454923 | 11800.1 |
| fe-s protein assembly co-chaperone hscb | VAPA_RS11395 | Not Available | Positive | 2454987 - 2455505 | 19429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
