Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | VAPA_RS11260 | Not Available | Positive | 2427984 - 2428355 | 14038.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11265 | Not Available | Positive | 2428352 - 2429320 | 34336.5 |
| tyrosine-type recombinase/integrase | VAPA_RS35145 | Not Available | Negative | 2429338 - 2429784 | 16895.5 |
| hypothetical protein | VAPA_RS35150 | Not Available | Negative | 2429860 - 2430159 | 11376.7 |
| trna dihydrouridine(20/20a) synthase dusa | VAPA_RS11275 | Not Available | Positive | 2430256 - 2431257 | 37742.4 |
| taud/tfda dioxygenase family protein | VAPA_RS11280 | Not Available | Negative | 2431275 - 2432153 | 33188.5 |
| hypothetical protein | VAPA_RS34460 | Not Available | Positive | 2432152 - 2432475 | 11382.1 |
| iclr family transcriptional regulator | VAPA_RS11285 | Not Available | Positive | 2432507 - 2433292 | 28075.8 |
| gntr family transcriptional regulator | VAPA_RS11290 | Not Available | Negative | 2433416 - 2434063 | 24085.0 |
| methylmalonyl-coa mutase | VAPA_RS11295 | Not Available | Positive | 2434192 - 2436354 | 78057.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
