Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11210 | Not Available | Positive | 2419184 - 2420155 | 34821.0 |
| voc family protein | VAPA_RS11215 | Not Available | Positive | 2420163 - 2421050 | 33098.8 |
| class ii aldolase/adducin family protein | VAPA_RS11220 | Not Available | Positive | 2421047 - 2421727 | 24362.4 |
| 2-hydroxymuconic semialdehyde dehydrogenase | VAPA_RS11225 | Not Available | Positive | 2421741 - 2423210 | 52270.3 |
| 2-keto-4-pentenoate hydratase | VAPA_RS11230 | Not Available | Positive | 2423207 - 2424001 | 28126.0 |
| 2-keto-4-pentenoate hydratase | VAPA_RS11235 | Not Available | Positive | 2424064 - 2424771 | 24988.1 |
| 2-hydroxymuconate tautomerase | VAPA_RS11240 | Not Available | Positive | 2424779 - 2424985 | 7038.43 |
| acetaldehyde dehydrogenase (acetylating) | VAPA_RS11245 | Not Available | Positive | 2424978 - 2425919 | 33051.0 |
| 4-hydroxy-2-oxovalerate aldolase | VAPA_RS11250 | Not Available | Positive | 2425916 - 2426971 | 37517.8 |
| nuclear transport factor 2 family protein | VAPA_RS11255 | Not Available | Negative | 2427321 - 2427710 | 14051.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
