Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-hept-4-ene-1,7-dioate hydratase | VAPA_RS11165 | Not Available | Positive | 2408277 - 2409077 | 29490.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11170 | Not Available | Positive | 2409166 - 2410116 | 33550.9 |
| m20 family metallopeptidase | VAPA_RS11175 | Not Available | Negative | 2410146 - 2411351 | 42465.1 |
| tannase/feruloyl esterase family alpha/beta hydrolase | VAPA_RS11180 | Not Available | Negative | 2411747 - 2412607 | 31352.2 |
| yran family protein | VAPA_RS35140 | Not Available | Negative | 2412615 - 2413391 | 27655.7 |
| fad-dependent oxidoreductase | VAPA_RS11185 | Not Available | Negative | 2413424 - 2414770 | 48263.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11190 | Not Available | Negative | 2414850 - 2415824 | 33774.1 |
| lysr family transcriptional regulator | VAPA_RS11195 | Not Available | Positive | 2415939 - 2416823 | 33256.6 |
| is5 family transposase | VAPA_RS11200 | Not Available | Positive | 2416966 - 2417943 | 36517.4 |
| lysr family transcriptional regulator | VAPA_RS11205 | Not Available | Negative | 2418142 - 2419095 | 34775.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
