Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | VAPA_RS11115 | Not Available | Negative | 2397076 - 2398077 | 35683.6 |
| iclr family transcriptional regulator | VAPA_RS11120 | Not Available | Positive | 2398229 - 2398993 | 27812.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11125 | Not Available | Positive | 2399335 - 2400330 | 34720.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS11130 | Not Available | Positive | 2400349 - 2401323 | 32568.8 |
| thiamine pyrophosphate-dependent enzyme | VAPA_RS11135 | Not Available | Positive | 2401326 - 2403014 | 59380.3 |
| aldehyde dehydrogenase family protein | VAPA_RS11140 | Not Available | Positive | 2403011 - 2404432 | 50171.3 |
| fumarylacetoacetate hydrolase family protein | VAPA_RS11145 | Not Available | Positive | 2404446 - 2405132 | 24360.0 |
| fumarylacetoacetate hydrolase family protein | VAPA_RS11150 | Not Available | Positive | 2405129 - 2405866 | 27401.8 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | VAPA_RS11155 | Not Available | Positive | 2405870 - 2407330 | 52311.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | VAPA_RS11160 | Not Available | Positive | 2407333 - 2408202 | 32195.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
